Mustafa Kirac
Research Assistant
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Address
Case Western Reserve University
Department of Electrical Engineering and Computer Science
10900 Euclid Avenue
Olin Bldg 503
Cleveland, OH, 44106
Office Phone: +1 216-368-8843
CV
You can find my CV here.
Academic History
Research
I am a member of the Database and Bioinformatics Lab and currently working with Prof. Gultekin Ozsoyoglu.
Interests
- Bioinformatics
- Computational Biology
- Databases
- Data Mining
Publications
Peer Reviewed Conference Publications
- Mustafa Kirac , Ali Cakmak, Gultekin Ozsoyoglu. Task-Oriented Integrated Use of Biological Web Data Sources. 18th International Conference on Scientific and Statistical Databases (SSDBM), Vienna, Austria, 2006. [Link]
- Mustafa Kirac , Gultekin Ozsoyoglu, Jiong Yang. Annotating Proteins by Mining Protein Interaction Networks. In Proceedings of 14th Annual International Conference on Intelligent Systems for Molecular Biology (ISMB), Fortaleza, Brazil, 2006.
- Ali Cakmak, Mustafa Kirac, Marc Reynolds, Meral Ozsoyoglu, Gultekin Ozsoyoglu. Gene Ontology-Based Annotation Analysis and Categorization of Metabolic Pathways. 19th International Conference on Scientific and Statistical Databases (SSDBM). Banff, Canada, 2007. [Link]
- Mustafa Kirac and Gultekin Ozsoyoglu. Protein Function Prediction Based on Patterns in Biological Networks, 12th Annual Int. Conf. on Research in Computational Molecular Biology (RECOMB), Singapore, March 30-April 2, 2008.
Peer Reviewed Journal Publications
- Mustafa Kirac, Gultekin Ozsoyoglu, and Jiong Yang. Annotating proteins by mining protein interaction networks. Bioinformatics, 2006. 22(14):e260-e270.
- Brendan Elliott, Mustafa Kirac, Ali Cakmak, Gokhan Yavas, Stephen Mayes, En Cheng, Yuan Wang, Chirag Gupta, Gultekin Ozsoyoglu, and Z.Meral Ozsoyoglu. PathCase: Pathways Database System. Bioinformatics (submitted).
Research In Progress
- Mustafa Kirac and Gultekin Ozsoyoglu. Assessing Reliability and Essentiality of Protein Interactions. (In Progress).
- Mustafa Kirac and Gultekin Ozsoyoglu. Pattern-oriented Prediction of Metabolic Reactions and Pathways. (In Progress).
Projects & Software
Personal Links